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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787549.1_cds_XP_016502771.1_168
CDS Infomation

[gene=LOC107820897] [db_xref=GeneID:107820897] [protein=protein NRT1/ PTR FAMILY 5.6-like] [protein_id=XP_016502771.1] [location=join(72695..72851,74323..74540,74912..75456,75548..76421)] [gbkey=CDS]
Sequence

ATGGATAAGATAAATGTGGAGATAGAACAGGTAATGAAAGCAGAATCAGTAGAAATAGAT
GGGGAAAAATGGGTTTATGATTCTTCTGTCGATCATAAAGGAAGAGTTCCTCTTAGGGAT
TCAACTGGTGTTTGGAAGGCCTCCCTCTTCATCATTGCGATTGAATTCAGTGAGAGGCTG
AGTTACTTTGGAATAGCCACAAGTTTGATCATATACCTAACGAAAGTCATCCATCAAGAC
CTCAAAACAGCAGCAATAAGTGTGAACTACTGGTCAGGGGTTACCACTTTGATGCCATTG
CTTGGAGGCTTTCTGGCTGACGCATACTTGGGAAGATTCTCCACTGTTCTTGTCTCTTCC
ACGGTCTACTTCCTGGGCTTGCTTCTCTTGACAATGTCTAGAGTGGTCCCGAGCTTAAAA
CCTTGTGACAGTAACCTCTGTGATGAATCAAAGAAAGTCCACGAGCCAATTTTCTTCCTT
GCCATATACTTAATCTCTATTGGAACCGGAGGACACAAGCCTTCTCTAGAGAGCTTTGGA
GCTGATCAATTTGATGATGAAAATCCTGAAGAAAGAAGAAAGAAGATGTCCTTTTTCAAC
TGGTGGAATTTTGGGCTTTGCTGTGGACTATTACTTGGTGTTACTCTTATCGTTTATGTC
CAAGAACATGTTAGCTGGGCTATGGCAGATATAATACTCACAGTAGTTATGGCTTCTAGT
ATAGCCATCTTCGTTGCAGGGCGGTCATCCTATCGTTATAGAAAAACAACTGGAAGTCCA
TTAACACCCATGCTACAGGTGCTTATAGCTGCAATTAGAAAAAGAAATCTTCATCTTCCT
TCAAATCCTTCTCATCTACATGAAGTTCCCAAGTCAGAAACTACCCAAAGGAAGCTCTTA
GGCCACACCACAAAGCTGAAGTTCCTTGATAAAGCTGCAATCCTGGATCACACACAAGAT
TCAATAGAACAGCAACAGAATGCATGGAAACTTGCAACTGTGACCAAGGTGGAAGAACTG
AAGCTACTTATCAACATGATTCCTATTTGGCTAACCACTTTACCGTTCGGTATATGTGTA
GCACAAGCTGCAACTTTTTTCATAAAACAAGGCGTGACAATGAATCGGAAAATCATTCAC
AATTTTGAGATTCCCCCAGCCTCAATTTATGCCCTGACAGCAGTTGGCATGATAATATCT
GTCACAATCTATGACAAAATCCTTGTACCTTTCATGAGAAGGGCAACAGGAAATGAGAGA
GGCATTAGTATTCTCCAAAGGATCGGTATTGGAATGATCTTCTCGGTTTCTACTATGGTA
GTTGCAGCTTTGGTTGAGAGAAAGAGACTGAATGTTGTTCATAAAAATCTTTTTGCGGGT
TCAGCTTCAATGAGTGTGTTTTGGCTAGCACCACAATTCCTTATCATTGGAATAGGAGAT
GGATTTACCTTAGTGGGATTGCAAGAATACTTCTATGACCAAGTACCCGATACCATGAGG
AGCTTGGGCATCGCACTTTACCTTAGTGTAATCGGTGCTGCAAATTTTATTAGCAGCCTC
TTGATAACCATTGTGGATCATATCACAGAGAACAGTGGCAAGAGTTGGTTTGGGAAGGAT
CTAAATAGCAGCCGGCTTGACTATTTTTACTGGTTGTTGGCTACCATCACAGCGGTAAAT
TTATGTGTCTATGTTTTTGTTGCAAGGAGTTATACCTACAAGAATGTGCACAGCATGACA
ACTATGGCTGTAGCCGATTGTGATGATGGGGATAATCGTAAAGCAATGGTTTAG

Peptide Sequence

PEP ID

XP_016502771.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana tabacum]
Sequence

MDKINVEIEQVMKAESVEIDGEKWVYDSSVDHKGRVPLRDSTGVWKASLFIIAIEFSERL
SYFGIATSLIIYLTKVIHQDLKTAAISVNYWSGVTTLMPLLGGFLADAYLGRFSTVLVSS
TVYFLGLLLLTMSRVVPSLKPCDSNLCDESKKVHEPIFFLAIYLISIGTGGHKPSLESFG
ADQFDDENPEERRKKMSFFNWWNFGLCCGLLLGVTLIVYVQEHVSWAMADIILTVVMASS
IAIFVAGRSSYRYRKTTGSPLTPMLQVLIAAIRKRNLHLPSNPSHLHEVPKSETTQRKLL
GHTTKLKFLDKAAILDHTQDSIEQQQNAWKLATVTKVEELKLLINMIPIWLTTLPFGICV
AQAATFFIKQGVTMNRKIIHNFEIPPASIYALTAVGMIISVTIYDKILVPFMRRATGNER
GISILQRIGIGMIFSVSTMVVAALVERKRLNVVHKNLFAGSASMSVFWLAPQFLIIGIGD
GFTLVGLQEYFYDQVPDTMRSLGIALYLSVIGAANFISSLLITIVDHITENSGKSWFGKD
LNSSRLDYFYWLLATITAVNLCVYVFVARSYTYKNVHSMTTMAVADCDDGDNRKAMV

Transcript Sequence

Gene sequence data has not been registered.